From patchwork Fri Aug 5 09:33:05 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: =?utf-8?b?TcSDZMSDbGluIElvbmVsIFBhdHJhyJljdQ==?= X-Patchwork-Id: 41298 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CB64327BBE9; Fri, 5 Aug 2022 10:36:04 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 55F5127BBEA for ; Fri, 5 Aug 2022 10:36:04 +0100 (BST) Received: from localhost ([::1]:55060 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1oJtkR-0003gk-D8 for patchwork@mira.cbaines.net; Fri, 05 Aug 2022 05:36:03 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:48804) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oJtiV-0003f5-7V for guix-patches@gnu.org; Fri, 05 Aug 2022 05:34:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:38258) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1oJtiU-0000Zq-Uv for guix-patches@gnu.org; Fri, 05 Aug 2022 05:34:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1oJtiU-0007lR-PJ; Fri, 05 Aug 2022 05:34:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#56999] [PATCH 3/4] gnu: Add phyml-phyrex. Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Fri, 05 Aug 2022 09:34:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 56999 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: To: <56999@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 56999-submit@debbugs.gnu.org id=B56999.165969200929779 (code B ref 56999); Fri, 05 Aug 2022 09:34:02 +0000 Received: (at 56999) by debbugs.gnu.org; 5 Aug 2022 09:33:29 +0000 Received: from localhost ([127.0.0.1]:56234 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oJthw-0007k8-Su for submit@debbugs.gnu.org; Fri, 05 Aug 2022 05:33:29 -0400 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:47203) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oJtht-0007jU-Tm for 56999@debbugs.gnu.org; Fri, 05 Aug 2022 05:33:26 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1659691999; x=1661506400; bh=QC7InJfAdZjam8o6E5aHvbZh9gc5sEi6Mt4ghO8c9to=; b=VqXo39FEiZ4+ Kn6hiIT8VC6D5OrEWpwdyy/KxUboeW7P5SLYzRMXQqh4bgJhWJ29ytD+p2G1a0As FC6dkgKdB1dzexYwEYzM84xo8cINSPYwZfogIsL+78Edzfzgs8Y0ssKjh5u5Czz1 15b9bYTGnr0Xpfdkz/+UlkzQoMRINBE= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id A65BE160398 for <56999@debbugs.gnu.org>; Fri, 5 Aug 2022 11:33:19 +0200 (CEST) Received: from Guix-Ubuntu18.04 (141.80.113.106) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.9; Fri, 5 Aug 2022 11:33:18 +0200 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Fri, 5 Aug 2022 11:33:05 +0200 Message-ID: <20220805093306.21767-3-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.37.1 In-Reply-To: <20220805093306.21767-1-madalinionel.patrascu@mdc-berlin.de> References: <20220805093306.21767-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [141.80.113.106] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27058.006 X-TM-AS-Result: No-10-0.190300-5.000000 X-TMASE-MatchedRID: BrKfIHwbYjV6fjezFKxXHArcxrzwsv5uwTlc9CcHMZerwqxtE531VDI3 NdfFmGpMfS0Ip2eEHnwj/1Rbkzl1E95/HgWYxplM5MIx11wv+CPKayT/BQTiGl6l++H8AVY9cGL tymQ2jAfd9ZDjW7EKJGbAMZMnf5wgDE9+4LiYESkQ3yaNtjB3vVDm1jZL+hG5zEtoW2aeDiKM9A CWHdUHZgAQiNUjB8O8tOdWe/Uk/vuwZO9kmaWWvP8+E8vSQCkfySOb56URxsg= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10-0.190300-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27058.006 X-TM-SNTS-SMTP: AFECD8AA2B064EFCA07F4526B68332D45288276267A081925C7D0D64B6538C262002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (phyml-phyrex): New variable. --- gnu/packages/bioinformatics.scm | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f448341031..1cb2b49eea 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9116,6 +9116,13 @@ (define-public phyml-mpi automake openmpi)))) +(define-public phyml-phyrex + (package (inherit phyml) + (name "phyml-phyrex") + (arguments + `(#:configure-flags + (list "--enable-phyrex"))))) + (define-public imp (package (name "imp")