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[bug#56166] gnu: Add r-awfisher.

Message ID 20220623122629.27603-1-madalinionel.patrascu@mdc-berlin.de
State New
Headers show
Series [bug#56166] gnu: Add r-awfisher. | expand

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Commit Message

Mădălin Ionel Patrașcu June 23, 2022, 12:26 p.m. UTC 
* gnu/packages/bioconductor.scm (r-awfisher): New variable.
---
 gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)


base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9

Comments

Ricardo Wurmus Oct. 31, 2022, 8:37 p.m. UTC | #1 
Applied, thanks!
diff mbox series

Patch

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..072fc0f42a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,29 @@  (define-public r-aneufinder
 sequencing data.")
     (license license:artistic2.0)))
 
+(define-public r-awfisher
+  (package
+    (name "r-awfisher")
+    (version "1.10.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "AWFisher" version))
+              (sha256
+               (base32
+                "050k7w0azsl7rqx2pxgccihzc2q8pmh6fyy4gib2d42sdyijr2n1"))))
+    (properties `((upstream-name . "AWFisher")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-edger
+           r-limma))
+    (native-inputs (list r-knitr))
+    (home-page "https://bioconductor.org/packages/AWFisher")
+    (synopsis  "Fast computing for adaptively weighted fisher's method")
+    (description
+     "This package is an implementation of the adaptively weighted fisher's
+method, including fast p-value computing, variability index, and meta-pattern.")
+    (license license:gpl3)))
+
 (define-public r-biocversion
   (package
     (name "r-biocversion")