From patchwork Thu Apr 28 18:19:32 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: "Paul A. Patience" X-Patchwork-Id: 38990 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 476A027BBEA; Thu, 28 Apr 2022 19:20:45 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 174F527BBE9 for ; Thu, 28 Apr 2022 19:20:45 +0100 (BST) Received: from localhost ([::1]:38314 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1nk8ku-0008GN-8p for patchwork@mira.cbaines.net; Thu, 28 Apr 2022 14:20:44 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:38566) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1nk8kG-0007jw-Fw for guix-patches@gnu.org; Thu, 28 Apr 2022 14:20:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:56025) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1nk8kG-0004ua-6R for guix-patches@gnu.org; Thu, 28 Apr 2022 14:20:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1nk8kG-00038c-1m for guix-patches@gnu.org; Thu, 28 Apr 2022 14:20:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55170] [PATCH 4/5] gnu: dealii: Add SUNDIALS dependency. 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Patience" Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 28 Apr 2022 18:20:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55170 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55170@debbugs.gnu.org Cc: ludovic.courtes@inria.fr, paul@apatience.com Received: via spool by 55170-submit@debbugs.gnu.org id=B55170.165116998911998 (code B ref 55170); Thu, 28 Apr 2022 18:20:03 +0000 Received: (at 55170) by debbugs.gnu.org; 28 Apr 2022 18:19:49 +0000 Received: from localhost ([127.0.0.1]:49917 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nk8k0-00037S-VZ for submit@debbugs.gnu.org; Thu, 28 Apr 2022 14:19:49 -0400 Received: from mail-4018.proton.ch ([185.70.40.18]:15129) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1nk8jy-00036k-8j for 55170@debbugs.gnu.org; Thu, 28 Apr 2022 14:19:46 -0400 Date: Thu, 28 Apr 2022 18:19:32 +0000 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=apatience.com; s=protonmail2; t=1651169980; bh=GfughrNWlPrfAe1MnjjEkxq8bxS1CYnNu9BsK/6X24M=; h=Date:To:From:Cc:Reply-To:Subject:Message-ID:In-Reply-To: References:Feedback-ID:From:To:Cc:Date:Subject:Reply-To: Feedback-ID:Message-ID; b=gldHwZIFxwSAIxVHlhg6Fc8MhfOG7WaHt6R4OzOnacA2p2oTsCM+aDMUPp/uHXtBi wuNDg9GkYocmCD3aYQE6Qr84tp8yVDY26P6GPaC/UFdXkziA84bP/P+25yWuGQCjsJ be7CdwPB88uXlOdCY+5ATmjAsvA+QQg7B/3Axg6JC3P4oD8G5N/YCjGuJFHFD4Pjnq D4sMtm8KrBlAJfqIa8DtSRVin4tmetw2fAGOxH1Q/mmH8UvZWygsPUO0s8iQv5suRI /bYRDZ8Be36gMdCtKNjASCv6Py0sQ3LKFE30uoxduI2cWnQYjClXz9gjBaEkZCMx6H fOXFlc+IrBGIw== From: "Paul A. Patience" Message-ID: <20220428181919.281837-4-paul@apatience.com> In-Reply-To: <20220428181919.281837-1-paul@apatience.com> References: <20220428181919.281837-1-paul@apatience.com> Feedback-ID: 19227857:user:proton MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-To: "Paul A. Patience" Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/maths.scm (dealii)[propagated-inputs]: Add sundials-5. Reformat list to clarify comment. (dealii-openmpi)[propagated-inputs]: Add sundials-openmpi-5. --- gnu/packages/maths.scm | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) -- 2.36.0 diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index e6ebada82b..c74f055a07 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -5205,7 +5205,11 @@ (define-public dealii ;; Anyway, they are meant to be used at build time, so rather than adding ;; the interpreters here, any package depending on them should just add ;; the requisite interpreter to its native inputs. - (list boost hdf5 suitesparse ; For UMFPACK. + (list boost + hdf5 + suitesparse ; For UMFPACK. + ;; SUNDIALS 6.0.0 and later will be supported in deal.II 9.4.0. + sundials-5 tbb)) (arguments `(#:build-type "DebugRelease" ; Supports only Debug, Release and DebugRelease. @@ -5255,12 +5259,13 @@ (define-public dealii-openmpi scalapack))) (propagated-inputs (modify-inputs (package-propagated-inputs dealii) - (delete "hdf5") + (delete "hdf5" "sundials") (prepend hdf5-parallel-openmpi openmpi p4est-openmpi petsc-openmpi slepc-openmpi + sundials-openmpi-5 trilinos-for-dealii-openmpi))) (arguments (substitute-keyword-arguments (package-arguments dealii)