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envelope-from=MadalinIonel.Patrascu@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-abarray): New variable. --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 803437a033..fffbf3da87 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1139,6 +1139,32 @@ (define-public r-abadata All datasets are restricted to protein coding genes.") (license license:gpl2+))) +(define-public r-abarray + (package + (name "r-abarray") + (version "1.62.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "ABarray" version)) + (sha256 + (base32 + "0yh7jmkwdg3kmm98ii0cxbla3s5bwy84fpg6xcpggsrriwzwfb5k")))) + (properties `((upstream-name . "ABarray"))) + (build-system r-build-system) + (propagated-inputs (list r-biobase r-multtest)) + (home-page "https://bioconductor.org/packages/ABarray") + (synopsis + "Gene expression analysis for Applied Biosystems Genome Survey Microarray") + (description + "The package @code{ABarray} is designed to work with Applied Biosystems +whole genome microarray platform, as well as any other platform whose data can +be transformed into expression data matrix. Functions include data +preprocessing, filtering, control probe analysis, statistical analysis in one +single function. A @dfn{graphical user interface} (GUI) is also provided. The +raw data, processed data, graphics output and statistical results are organized +into folders according to the analysis settings used.") + (license license:gpl2+))) + (define-public r-aneufinderdata (package (name "r-aneufinderdata")