@@ -1965,6 +1965,33 @@ (define-public r-deconstructsigs
closely reconstructs the mutational profile.")
(license license:gpl2+)))
+;; This is a CRAN package, but it depends on Bioconductor packages.
+(define-public r-jetset
+ (package
+ (name "r-jetset")
+ (version "3.4.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "jetset" version))
+ (sha256
+ (base32 "0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"))))
+ (properties `((upstream-name . "jetset")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-annotationdbi r-org-hs-eg-db))
+ (home-page "http://www.cbs.dtu.dk/biotools/jetset/")
+ (synopsis "One-to-one gene-probeset mapping for Affymetrix human microarrays")
+ (description
+ "This package provides a one-to-one mapping from gene to \"best\" probe
+set for four Affymetrix human gene expression microarrays: hgu95av2, hgu133a,
+hgu133plus2, and u133x3p. On Affymetrix gene expression microarrays, a single
+gene may be measured by multiple probe sets. This can present a mild
+conundrum when attempting to evaluate a gene \"signature\" that is defined by
+gene names rather than by specific probe sets. This package also includes the
+pre-calculated probe set quality scores that were used to define the
+mapping.")
+ (license license:artistic2.0)))
+
;; This is a CRAN package, but it depends on Bioconductor packages.
(define-public r-nmf
(package