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[bug#48575,22/50] gnu: r-affy: Move to (gnu packages bioconductor).

Message ID 20210521202622.26591-22-zimon.toutoune@gmail.com
State Accepted
Headers show
Series Move some Bioconductor packages to (gnu packages bioconductor). | expand

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Commit Message

zimoun May 21, 2021, 8:25 p.m. UTC
* gnu/packages/bioinformatics.scm (r-affy): Move from here...
* gnu/packages/bioconductor.scm (r-affy): ...to here.
---
 gnu/packages/bioconductor.scm   | 28 ++++++++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 28 ----------------------------
 2 files changed, 28 insertions(+), 28 deletions(-)
diff mbox series

Patch

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 313ed7e36f..6d60b5884c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1550,6 +1550,34 @@  optimized in C++, and the main interface function provides an easy way of
 performing parallel computations on multicore machines.")
     (license license:gpl2+)))
 
+(define-public r-affy
+  (package
+    (name "r-affy")
+    (version "1.68.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "affy" version))
+       (sha256
+        (base32
+         "0ywz548cbzk2k1njnxhlk5ydzvz2dk78ka8kx53gwrmdc4sc2b06"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-affyio" ,r-affyio)
+       ("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-biocmanager" ,r-biocmanager)
+       ("r-preprocesscore" ,r-preprocesscore)
+       ("r-zlibbioc" ,r-zlibbioc)))
+    (inputs
+     `(("zlib" ,zlib)))
+    (home-page "https://bioconductor.org/packages/affy")
+    (synopsis "Methods for affymetrix oligonucleotide arrays")
+    (description
+     "This package contains functions for exploratory oligonucleotide array
+analysis.")
+    (license license:lgpl2.0+)))
+
 (define-public r-affycomp
   (package
     (name "r-affycomp")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 33680c283d..b789ecd977 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8958,34 +8958,6 @@  upon file format information.  The primary focus is on accessing the CEL and
 CDF file formats.")
     (license license:lgpl2.0+)))
 
-(define-public r-affy
-  (package
-    (name "r-affy")
-    (version "1.68.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "affy" version))
-       (sha256
-        (base32
-         "0ywz548cbzk2k1njnxhlk5ydzvz2dk78ka8kx53gwrmdc4sc2b06"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-affyio" ,r-affyio)
-       ("r-biobase" ,r-biobase)
-       ("r-biocgenerics" ,r-biocgenerics)
-       ("r-biocmanager" ,r-biocmanager)
-       ("r-preprocesscore" ,r-preprocesscore)
-       ("r-zlibbioc" ,r-zlibbioc)))
-    (inputs
-     `(("zlib" ,zlib)))
-    (home-page "https://bioconductor.org/packages/affy")
-    (synopsis "Methods for affymetrix oligonucleotide arrays")
-    (description
-     "This package contains functions for exploratory oligonucleotide array
-analysis.")
-    (license license:lgpl2.0+)))
-
 (define-public r-vsn
   (package
     (name "r-vsn")