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Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 08 Mar 2021 17:59:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 47010 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 47010@debbugs.gnu.org Cc: zimoun Received: via spool by 47010-submit@debbugs.gnu.org id=B47010.161522630910290 (code B ref 47010); Mon, 08 Mar 2021 17:59:04 +0000 Received: (at 47010) by debbugs.gnu.org; 8 Mar 2021 17:58:29 +0000 Received: from localhost ([127.0.0.1]:44769 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lJK9F-0002fo-1w for submit@debbugs.gnu.org; Mon, 08 Mar 2021 12:58:29 -0500 Received: from mail-wr1-f51.google.com ([209.85.221.51]:37747) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lJK9A-0002eG-Rp for 47010@debbugs.gnu.org; Mon, 08 Mar 2021 12:58:25 -0500 Received: by mail-wr1-f51.google.com with SMTP id v15so12412671wrx.4 for <47010@debbugs.gnu.org>; Mon, 08 Mar 2021 09:58:24 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=Hfwe981xk/fEpxYQtDfziH+EYmZh/iF2HCkCZqkuZoQ=; b=dt7SGIhzhqtofYI6PvdWykaBkHM+wGrIYrE0pwBrmoHrl0G0v1ITOmk11wFTPcpF2o QP7Wb8o2d0M5FqZ+n0aBAXq0vjbftbTw10St4TaZy+yViy4nHt8PEYuipUlWgqX4bbyC lRlpvUGV3+Vbl4WrvMjsznqhlZOlFkpBw6YoS9WC12sa8b22Bis8cjkn/TY3EeuToOrI suGGDQNAeT/hJAfdylMo+9vJWF3j4IummUz6JCyspsE6dxELeVj7AJ+1QlAT9pYpY/Lo BrFm45Z0j4aaLd23fOFNyJ4OIbkYqSNlTdC93Pr/V71253t2m8BsZO+9CcNlhPZvyjTi Hy6g== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=Hfwe981xk/fEpxYQtDfziH+EYmZh/iF2HCkCZqkuZoQ=; b=n6j6mxboSMDb8Mqbt/3y7seBYvysZXpo+P2ooWsHpafnxfekayugClZRUaZ3k++Onl TdfNiyDd3PbDg7KGHZCcDfW8i4zFpIhrqwgeMt1OsuU2CnRsgWkbpnBzWeP6L3npv0HC AVtQhcsWiug7YgPOL75xJFxKaFw9UOE8F6ARhdos5Bpv/3ZWIXqDzS05C7KfK9WCl05n ufEt7os41yxF4eRSEAFCAtFFyjm7jx+n+4lvhGQYms5SlMij4YljTen0dqG/pgUc/5Oc J0NbiuWv9RZxY4dgPJwOzqvKULb7686lZhhgM8AzbosGYl3Z06zZVYQGad8TNsxVUKMD LFWg== X-Gm-Message-State: AOAM53327lM0gcNPEpeSrOq2XKyXrzU0Uf8XBaIaud6v5sRfnjGtzSdx DPldLymhQ34N/XHKAUHSq+X6aSpoTLE= X-Google-Smtp-Source: ABdhPJy7aqmO73n45ZUNPSSW74dHU//a/nBsrUwYs4jiF/bb3Vuj88p14DggZqeX05xpbsfKgslKZg== X-Received: by 2002:a5d:54c4:: with SMTP id x4mr23705778wrv.329.1615226299264; Mon, 08 Mar 2021 09:58:19 -0800 (PST) Received: from localhost.localdomain ([193.48.40.110]) by smtp.gmail.com with ESMTPSA id 75sm96993wma.23.2021.03.08.09.58.18 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 08 Mar 2021 09:58:18 -0800 (PST) From: zimoun Date: Mon, 8 Mar 2021 18:58:00 +0100 Message-Id: <20210308175802.62517-7-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.30.1 In-Reply-To: <20210308175802.62517-1-zimon.toutoune@gmail.com> References: <20210308175802.62517-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (r-category): Move from here... * gnu/packages/bioconductor.scm (r-category): ...to here. --- gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++ gnu/packages/bioinformatics.scm | 31 ------------------------------- 2 files changed, 31 insertions(+), 31 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a17c6beeef..4e3dd25d61 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1519,6 +1519,37 @@ microarrays.") databases. Packages produced are intended to be used with AnnotationDbi.") (license license:artistic2.0))) +(define-public r-category + (package + (name "r-category") + (version "2.56.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "Category" version)) + (sha256 + (base32 + "0m77wpnica0h2ia9ajdaiga4plgz1s9wls6pdnxzk7kwl8a68wkr")))) + (properties `((upstream-name . "Category"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotate" ,r-annotate) + ("r-annotationdbi" ,r-annotationdbi) + ("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-genefilter" ,r-genefilter) + ("r-graph" ,r-graph) + ("r-gseabase" ,r-gseabase) + ("r-matrix" ,r-matrix) + ("r-rbgl" ,r-rbgl) + ("r-dbi" ,r-dbi))) + (home-page "https://bioconductor.org/packages/Category") + (synopsis "Category analysis") + (description + "This package provides a collection of tools for performing category +analysis.") + (license license:artistic2.0))) + (define-public r-deseq2 (package (name "r-deseq2") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 23b8ce6892..6b32f3416c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7385,37 +7385,6 @@ includes software to ") (license license:cc0)))) -(define-public r-category - (package - (name "r-category") - (version "2.56.0") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "Category" version)) - (sha256 - (base32 - "0m77wpnica0h2ia9ajdaiga4plgz1s9wls6pdnxzk7kwl8a68wkr")))) - (properties `((upstream-name . "Category"))) - (build-system r-build-system) - (propagated-inputs - `(("r-annotate" ,r-annotate) - ("r-annotationdbi" ,r-annotationdbi) - ("r-biobase" ,r-biobase) - ("r-biocgenerics" ,r-biocgenerics) - ("r-genefilter" ,r-genefilter) - ("r-graph" ,r-graph) - ("r-gseabase" ,r-gseabase) - ("r-matrix" ,r-matrix) - ("r-rbgl" ,r-rbgl) - ("r-dbi" ,r-dbi))) - (home-page "https://bioconductor.org/packages/Category") - (synopsis "Category analysis") - (description - "This package provides a collection of tools for performing category -analysis.") - (license license:artistic2.0))) - (define-public r-gostats (package (name "r-gostats")