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[bug#47010,06/10] gnu: r-gseabase: Move to (gnu packages bioconductor).

Message ID 20210308175802.62517-6-zimon.toutoune@gmail.com
State Accepted
Headers show
Series Move some Bioconductor packages to (gnu packages bioconductor). | expand

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Commit Message

Simon Tournier March 8, 2021, 5:57 p.m. UTC 
* gnu/packages/bioinformatics.scm (r-gseabase): Move from here...
* gnu/packages/bioconductor.scm (r-gseabase): ...to here.
---
 gnu/packages/bioconductor.scm   | 29 +++++++++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 29 -----------------------------
 2 files changed, 29 insertions(+), 29 deletions(-)
diff mbox series

Patch

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 0a9dc4f9ba..a17c6beeef 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1630,6 +1630,35 @@  exploration of the results.")
 high-throughput sequencing experiments.")
     (license license:artistic2.0)))
 
+(define-public r-gseabase
+  (package
+    (name "r-gseabase")
+    (version "1.52.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "GSEABase" version))
+       (sha256
+        (base32
+         "0dawh1kjmf6921jm77j2s2phrq5237pjc4sdh8fkln89gf48zx6i"))))
+    (properties `((upstream-name . "GSEABase")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-annotate" ,r-annotate)
+       ("r-annotationdbi" ,r-annotationdbi)
+       ("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-graph" ,r-graph)
+       ("r-xml" ,r-xml)))
+    (native-inputs
+     `(("r-knitr" ,r-knitr)))
+    (home-page "https://bioconductor.org/packages/GSEABase")
+    (synopsis "Gene set enrichment data structures and methods")
+    (description
+     "This package provides classes and methods to support @dfn{Gene Set
+Enrichment Analysis} (GSEA).")
+    (license license:artistic2.0)))
+
 (define-public r-hpar
   (package
     (name "r-hpar")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0f96ffc02e..23b8ce6892 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7385,35 +7385,6 @@  includes software to
 ")
       (license license:cc0))))
 
-(define-public r-gseabase
-  (package
-    (name "r-gseabase")
-    (version "1.52.1")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "GSEABase" version))
-       (sha256
-        (base32
-         "0dawh1kjmf6921jm77j2s2phrq5237pjc4sdh8fkln89gf48zx6i"))))
-    (properties `((upstream-name . "GSEABase")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-annotate" ,r-annotate)
-       ("r-annotationdbi" ,r-annotationdbi)
-       ("r-biobase" ,r-biobase)
-       ("r-biocgenerics" ,r-biocgenerics)
-       ("r-graph" ,r-graph)
-       ("r-xml" ,r-xml)))
-    (native-inputs
-     `(("r-knitr" ,r-knitr)))
-    (home-page "https://bioconductor.org/packages/GSEABase")
-    (synopsis "Gene set enrichment data structures and methods")
-    (description
-     "This package provides classes and methods to support @dfn{Gene Set
-Enrichment Analysis} (GSEA).")
-    (license license:artistic2.0)))
-
 (define-public r-category
   (package
     (name "r-category")