From patchwork Tue Mar 10 19:29:07 2020 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Felix Gruber X-Patchwork-Id: 20627 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id A0F2F27BBEA; Tue, 10 Mar 2020 19:31:24 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.2 (2018-09-13) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,DKIM_SIGNED, MAILING_LIST_MULTI,T_DKIM_INVALID,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.2 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTP id 5E66727BBE4 for ; Tue, 10 Mar 2020 19:31:24 +0000 (GMT) Received: from localhost ([::1]:39258 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jBkb5-0004et-ST for patchwork@mira.cbaines.net; Tue, 10 Mar 2020 15:31:23 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:53505) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jBkan-0004Zm-8S for guix-patches@gnu.org; Tue, 10 Mar 2020 15:31:07 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1jBkal-0000Np-Th for guix-patches@gnu.org; Tue, 10 Mar 2020 15:31:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:47400) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1jBkal-0000NT-PK for guix-patches@gnu.org; Tue, 10 Mar 2020 15:31:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1jBkal-0002B8-M5 for guix-patches@gnu.org; Tue, 10 Mar 2020 15:31:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#39862] [PATCH v2 3/6] gnu: Add dune-subgrid Resent-From: Felix Gruber Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 10 Mar 2020 19:31:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 39862 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 39862@debbugs.gnu.org Cc: Felix Gruber , zimoun Received: via spool by 39862-submit@debbugs.gnu.org id=B39862.15838686448310 (code B ref 39862); Tue, 10 Mar 2020 19:31:03 +0000 Received: (at 39862) by debbugs.gnu.org; 10 Mar 2020 19:30:44 +0000 Received: from localhost ([127.0.0.1]:53366 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jBkaS-00029x-IR for submit@debbugs.gnu.org; Tue, 10 Mar 2020 15:30:44 -0400 Received: from mout01.posteo.de ([185.67.36.65]:43563) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jBkaR-00029l-03 for 39862@debbugs.gnu.org; Tue, 10 Mar 2020 15:30:43 -0400 Received: from submission (posteo.de [89.146.220.130]) by mout01.posteo.de (Postfix) with ESMTPS id 7DE02160060 for <39862@debbugs.gnu.org>; Tue, 10 Mar 2020 20:30:36 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1583868636; bh=UpD2twPOjpTQkhPrcq4UMu7pjhU7pWUnn54qWM7J8OM=; h=From:To:Cc:Subject:Date:From; b=m8X72WLz+a1Ui5DISq4gyXABGgsF0O8fs36w6Y2z+XE+3Qxrx/ZFz8B2DoB+2FfIx 38YZrtvb8dd3o25t4syX+DNmwypFYA1YXhBkFTgB8jaBKJMHlkpIfpWNf6MMeui60p 0K2Mt1lOAnPzi+ozEyN8Bcs3W8tGYxeAhYhoiFkZmcKE71b0lx43JkSFfSQegVwzas /s5OYMvGXrc8EdA/n4ZS0BMmfJbp4MBZMms/4NIxN3V/d4Fy9yXXARDnmpHd7dYC0+ soIjI/pFwfADzPllPdIAa5/QWO8TjVSbFZMcHPCNphohpb1dEpNBv2cxv1uD68BO0J l9HimBUsc11pw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 48cQDC3gX3z6tmf; Tue, 10 Mar 2020 20:30:35 +0100 (CET) From: Felix Gruber Date: Tue, 10 Mar 2020 20:29:07 +0100 Message-Id: <20200310192910.6251-4-felgru@posteo.net> X-Mailer: git-send-email 2.25.1 In-Reply-To: <5e890189-d5f7-a646-fe37-1f93115d17f9@posteo.net> References: <5e890189-d5f7-a646-fe37-1f93115d17f9@posteo.net> MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-Received-From: 209.51.188.43 X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/maths.scm (dune-subgrid): New variable. --- gnu/packages/maths.scm | 43 ++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 43 insertions(+) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 3f89efeff4..9da38aad68 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -4871,6 +4871,49 @@ implementation of the DUNE grid interface supporting either simplices or cubes.") (license license:gpl2+))) +(define-public dune-subgrid + (package + (name "dune-subgrid") + (version "2.6.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://git.imp.fu-berlin.de/agnumpde/dune-subgrid") + (commit "releases/2.6-1"))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1gcv35rx3knqd54r4pp9rzd639db4j8w2r2ibq43w1mgwdcqhs64")))) + (build-system cmake-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'build 'build-tests + (lambda* (#:key make-flags #:allow-other-keys) + (apply invoke "make" "build_tests" make-flags))) + (add-before 'check 'mpi-setup + ,%openmpi-setup)))) + (inputs + `(("dune-common" ,dune-common) + ("dune-geometry" ,dune-geometry) + ("dune-grid" ,dune-grid) + ("openmpi" ,openmpi) + ;; Optional + ("metis" ,metis) + ("openblas" ,openblas) + ("gmp" ,gmp))) + (native-inputs + `(("gfortran" ,gfortran) + ("pkg-config" ,pkg-config))) + (home-page "http://numerik.mi.fu-berlin.de/dune-subgrid/index.php") + (synopsis "Distributed and Unified Numerics Environment") + (description "The dune-subgrid module allows to mark elements of +another hierarchical dune grid. The set of marked elements can then be +accessed as a hierarchical dune grid in its own right. Dune-Subgrid +provides the full grid interface including adaptive mesh refinement.") + (license license:gpl2+))) + (define-public dune-typetree (package (name "dune-typetree")