From patchwork Wed Oct 30 10:25:29 2019 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Simon Tournier X-Patchwork-Id: 15896 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 75AC917685; Wed, 30 Oct 2019 10:26:25 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.0 (2014-02-07) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-1.9 required=5.0 tests=BAYES_00,FREEMAIL_FROM, RCVD_IN_MSPIKE_H2,T_DKIM_INVALID,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.0 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTP id 3579417674 for ; Wed, 30 Oct 2019 10:26:25 +0000 (GMT) Received: from localhost ([::1]:38702 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1iPlBI-0007dA-Ec for patchwork@mira.cbaines.net; Wed, 30 Oct 2019 06:26:24 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:40343) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1iPlB4-0007XW-U1 for guix-patches@gnu.org; Wed, 30 Oct 2019 06:26:12 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1iPlAz-0002p7-QC for guix-patches@gnu.org; Wed, 30 Oct 2019 06:26:10 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:40483) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1iPlAz-0002oA-LQ for guix-patches@gnu.org; Wed, 30 Oct 2019 06:26:05 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1iPlAz-0005WH-DD for guix-patches@gnu.org; Wed, 30 Oct 2019 06:26:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#37988] [PATCH 4/6] gnu: Add r-cytolib. Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Wed, 30 Oct 2019 10:26:05 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 37988 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 37988@debbugs.gnu.org Cc: zimoun Received: via spool by 37988-submit@debbugs.gnu.org id=B37988.157243116121177 (code B ref 37988); Wed, 30 Oct 2019 10:26:05 +0000 Received: (at 37988) by debbugs.gnu.org; 30 Oct 2019 10:26:01 +0000 Received: from localhost ([127.0.0.1]:49298 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1iPlAv-0005VL-54 for submit@debbugs.gnu.org; Wed, 30 Oct 2019 06:26:01 -0400 Received: from mail-wm1-f67.google.com ([209.85.128.67]:54928) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1iPlAi-0005U5-4e for 37988@debbugs.gnu.org; Wed, 30 Oct 2019 06:25:52 -0400 Received: by mail-wm1-f67.google.com with SMTP id g7so1483210wmk.4 for <37988@debbugs.gnu.org>; Wed, 30 Oct 2019 03:25:48 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=FcZxrj0YZSeBRnqLcu/Ekvd3AWYSVWoCWNlHFphsfPs=; b=UvyrAbdwOYJWLwZMpq9nUhwAgit/UIsWJrNcO+QXXaESP5DBLVEakYYSZNCt10DYaW p049WElBzP2raCtk9ztl/Lm9zaf/LwTvOrI8g8YF9fgr5cezih4B9gw9udx5xneXd8V7 2VAw/YXw4tjh/63aF3KToEsbrufkNWBC71g3fvenC/xsVD8rWaEc4lRBYgtUHTDDl9+k 92gNA6JpnOFQfeCaiTVGN1FP6S/45M53WAsybZlKI3Ed1iA6pEWAzUf0rk7rkrjUS08o IUebQQJtw03V7xV+4tJjCDK6qv3zUXZhUgPzw3QxfCN4qtQ22MPTClgVcP5mqDdi6qBw xGhQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=FcZxrj0YZSeBRnqLcu/Ekvd3AWYSVWoCWNlHFphsfPs=; b=AbQvN8MyzQB19Aw62SnifCOYzv19I7MnLeDGk37hfbf2ikNhqnQqLBRn+3k7bN25+N Nx4oVOEXjoZ9o/cV8oE+rg/FXN2bWIEsB51dnyodx3nDYv1MCuzT1LgoS4LggwWqcddw mgx1U0owqCFRCtIlMb3+v/hIWyZ3SZwLMi+B5hmUc3yFJjHF6lUkiP5skC+ccpmCjgQW hGp44PXTGfIkYAbhjRtdQzBPVwd7chIv1TTnr2rsovrNErY1eCGVXOoDJMTwem0dZte1 3mjaB0MRGkbti/Ymy8+PdxVDazkMfN3kt/ZhtNDGhJgAqdDCBYa0sgz2U78bxSi6kksJ qeEw== X-Gm-Message-State: APjAAAV/vN8FLnHwxBr5DJ8by9PXPARAoDBj3mZ412BSgQES1YEc7Qvc tLhQtZI7fH8fXKzp3cWhtFejPDp0 X-Google-Smtp-Source: APXvYqziPLoI9aw3UaSRs1kZqK6Xx7xP9wXTuK6/9RY2UhsCZOaKnwAv4kDErSb9I4lQqCnnP3dkjg== X-Received: by 2002:a1c:6308:: with SMTP id x8mr8402811wmb.140.1572431142301; Wed, 30 Oct 2019 03:25:42 -0700 (PDT) Received: from pfiuh02.univ-paris-diderot.fr ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id x205sm2493321wmb.5.2019.10.30.03.25.41 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 30 Oct 2019 03:25:41 -0700 (PDT) From: zimoun Date: Wed, 30 Oct 2019 11:25:29 +0100 Message-Id: <20191030102531.12495-4-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.23.0 In-Reply-To: <20191030102531.12495-1-zimon.toutoune@gmail.com> References: <20191030102531.12495-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-Received-From: 209.51.188.43 X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-cytolib): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7c1761852c..a5c6e1ed55 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6205,3 +6205,26 @@ data.") (description "This package provides the headers and static library of Protocol buffers 2.6.0 for other R packages to compile and link against.") (license license:bsd-3))) + +(define-public r-cytolib + (package + (name "r-cytolib") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "cytolib" version)) + (sha256 + (base32 + "10sdkwrmzmp3sh59hl3x0zxwlw77v80jnv8gz1qrv66skjb764cq")))) + (properties + `((upstream-name . "cytolib"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bh" ,r-bh) + ("r-rprotobuflib" ,r-rprotobuflib))) + (home-page "https://bioconductor.org/packages/cytolib") + (synopsis "C++ infrastructure for representing and interacting with the gated cytometry") + (description "This package provides the core data structure and API to +represent and interact with the gated cytometry data.") + (license license:artistic2.0)))