From patchwork Thu Jun 22 09:19:14 2023 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Efraim Flashner X-Patchwork-Id: 51168 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 106D327BBE2; Thu, 22 Jun 2023 10:24:41 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id ECE2D27BBE9 for ; Thu, 22 Jun 2023 10:24:39 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1qCGXv-0006gr-DI; Thu, 22 Jun 2023 05:24:07 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qCGXt-0006fY-A4 for guix-patches@gnu.org; Thu, 22 Jun 2023 05:24:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1qCGXr-0004e1-MU for guix-patches@gnu.org; Thu, 22 Jun 2023 05:24:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1qCGXr-0001bd-Hv for guix-patches@gnu.org; Thu, 22 Jun 2023 05:24:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#64218] [PATCH 7/7] gnu: sambamba: Fix building. Resent-From: Efraim Flashner Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 22 Jun 2023 09:24:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 64218 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 64218@debbugs.gnu.org Cc: Efraim Flashner Received: via spool by 64218-submit@debbugs.gnu.org id=B64218.16874257926080 (code B ref 64218); Thu, 22 Jun 2023 09:24:03 +0000 Received: (at 64218) by debbugs.gnu.org; 22 Jun 2023 09:23:12 +0000 Received: from localhost ([127.0.0.1]:34830 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qCGX2-0001Zv-Bd for submit@debbugs.gnu.org; Thu, 22 Jun 2023 05:23:12 -0400 Received: from mail-wr1-f46.google.com ([209.85.221.46]:46356) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qCGWx-0001YR-7d for 64218@debbugs.gnu.org; Thu, 22 Jun 2023 05:23:07 -0400 Received: by mail-wr1-f46.google.com with SMTP id ffacd0b85a97d-3113306a595so5869188f8f.1 for <64218@debbugs.gnu.org>; Thu, 22 Jun 2023 02:23:07 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20221208; t=1687425781; x=1690017781; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:sender:from:to:cc:subject:date :message-id:reply-to; bh=Fsmz/MdL6PgES4KuX5+3jp38cZE8qViqFvDsx59TS94=; b=Li6vSKURmVNPRRA1ybRL4dpoUE9nnPJZH9SJb6DVaZN8BpaOa23oWV/2IoAtIQQJbu z+sWdFFdxITr0b+skApydyOhNXyCbQeHPRDWzezodMAwi+DkpYLll1ocCi9qrnROfFX5 4dLbYQSrDE3T3JynGawGUJJskGVi+0QCaz3tHMTMbdCxqHyGHFU4l+t/lfBwCp11IcJP 1kDZm7j2EdUjR3py3LfECVu6fXFkRKEMtUm727rijoY+bWAOgFjukoTGxMgNY/crN/Pa 5r/z+EDEjI8alF1S0RQMG8HXyNc571C1X5L0RLlL0fV1qNVFVyCybaZ30JPDqatKkQJz zr6A== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20221208; t=1687425781; x=1690017781; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:sender:x-gm-message-state:from :to:cc:subject:date:message-id:reply-to; bh=Fsmz/MdL6PgES4KuX5+3jp38cZE8qViqFvDsx59TS94=; b=jVUqaYxwY5XcgEHmU+328H40lg8TPhwLYIN+HqhdjY0LkZR0Po5QxZtsgcdWNkbOlT dkzdTybAL17mQoH2h7inQcESHisEbauXMFjpoS4Om7m4y4cfj8MVxWUeZn+DixfRl7gE YvCIRly+N4uiTs+zvZDRgTuZsL5GMnvwcQUxG7b6MZr6T20kW1OO7Y2R/nWskT4Onl+e H1zTDq9xVXJyUHamTmdcHamgVAy+g8J/JJ2rojbvm7qde02y132CLL0qb5hcdtGDvNAi mNvk4W9BRcNxIwEs2+EooMcPoEIjQPufYbvBu2qxcyLNh0aWTI8F/Z6W2mYFJh9J106c C4Dg== X-Gm-Message-State: AC+VfDzYKahexCFw4tswlx7uPKW+SIEI4yHDxggM4znh2J3X0UI5vC6n 2+6z6Hrhr/N61lgDUAJcpMvSzBcREFgplQ== X-Google-Smtp-Source: ACHHUZ7U0v0FV0f++AJf2NKn2DNvsJHlsY7y7luNy1Mxz/C9GUPJTgbZWXuwTOTwnGqYpzHTxuNjpw== X-Received: by 2002:a5d:4387:0:b0:311:1108:96ac with SMTP id i7-20020a5d4387000000b00311110896acmr17386858wrq.52.1687425781316; Thu, 22 Jun 2023 02:23:01 -0700 (PDT) Received: from localhost ([188.120.129.124]) by smtp.gmail.com with ESMTPSA id e10-20020a5d65ca000000b002f28de9f73bsm6547004wrw.55.2023.06.22.02.23.00 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Thu, 22 Jun 2023 02:23:00 -0700 (PDT) From: Efraim Flashner Date: Thu, 22 Jun 2023 12:19:14 +0300 Message-Id: <1ecebd6162fabea2e9fd0f2c849ecf079a008355.1687425321.git.efraim@flashner.co.il> X-Mailer: git-send-email 2.40.1 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (sambamba)[native-inputs]: Remove ld-gold-wrapper, bintutils-gold. Remove input labels. --- gnu/packages/bioinformatics.scm | 8 +------- 1 file changed, 1 insertion(+), 7 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4edcc28d12..87e7c33b90 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11732,13 +11732,7 @@ (define-public sambamba (copy-file (string-append "bin/sambamba-" ,version) (string-append bin "/sambamba")))))))) (native-inputs - `(("ld-gold-wrapper" - ;; Importing (gnu packages commencement) would introduce a cycle. - ,(module-ref (resolve-interface - '(gnu packages commencement)) - 'ld-gold-wrapper)) - ("binutils-gold" ,binutils-gold) - ("python" ,python))) + (list python)) (inputs (list ldc lz4 zlib)) (home-page "https://github.com/biod/sambamba")