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Resent-From: Navid Afkhami Original-Sender: "Debbugs-submit" Resent-CC: laurent.gatto@gmail.com, rekado@elephly.net, zimon.toutoune@gmail.com, guix-patches@gnu.org Resent-Date: Thu, 16 Jan 2025 16:45:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 75607 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 75607@debbugs.gnu.org Cc: Navid Afkhami , Laurent Gatto , Ricardo Wurmus , Simon Tournier X-Debbugs-Original-To: X-Debbugs-Original-Xcc: Laurent Gatto , Ricardo Wurmus , Simon Tournier Received: via spool by submit@debbugs.gnu.org id=B.173704584524897 (code B ref -1); Thu, 16 Jan 2025 16:45:01 +0000 Received: (at submit) by debbugs.gnu.org; 16 Jan 2025 16:44:05 +0000 Received: from localhost ([127.0.0.1]:34434 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tYSyT-0006TU-4A for submit@debbugs.gnu.org; Thu, 16 Jan 2025 11:44:05 -0500 Received: from lists.gnu.org ([2001:470:142::17]:58154) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tYSyR-0006SK-2P for submit@debbugs.gnu.org; Thu, 16 Jan 2025 11:44:04 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tYSyL-0001aw-5E for guix-patches@gnu.org; Thu, 16 Jan 2025 11:43:57 -0500 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tYSyJ-0003pl-2j for guix-patches@gnu.org; Thu, 16 Jan 2025 11:43:56 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received; s=mdc; t=1737045831; x=1738860232; bh=0ShvkmQtJWcJKOh UqahoXO/9kA/OcmZm6U6SSDkSMaw=; b=gC6uKc7v8cPBLUHgE+kLJ2j0kbvum9P mrnmPiW2KJrHWhV8Z043iuXZcc8QCa48hmTJEjMF0CSqBpF2VbSCyWr8nN8aARie OAdLs3vFYtWe/EskoyK9fcs/NXZouTieAd7M7WRSGE9/NzoBsxOcWPV4GVc5Tgxa /q2cPYkECuOg= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id 1084EA0144 for ; Thu, 16 Jan 2025 17:43:50 +0100 (CET) Received: from localhost (141.80.121.117) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.2.1544.14; Thu, 16 Jan 2025 17:43:50 +0100 From: Navid Afkhami Date: Thu, 16 Jan 2025 16:43:46 +0000 Message-ID: <14c399de628a4471d33f89fd70fecf813106f6e0.1737045826.git.navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.43.0 MIME-Version: 1.0 X-Originating-IP: [141.80.121.117] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3223-9.1.2019-28928.001 X-TM-AS-Result: No-10--10.409100-5.000000 X-TMASE-MatchedRID: GQw6Xh/XS6UEZ1mm50iAbnOjEKYddvv63O2+pOfl+vcwLJ9PZUBQhTny lHiK0ou/dUrDLAqwc7FUcGlv7IVDI4dGq5XlvEmXUrLQDoO1CVcp1uh0WG5bZlplPSD8ytIJJYP b4fzEodhT0l6jKl8H33rqUdDqJCLVas6B1L4Ii280r323/GwkiA2LmwHT7i+nutCVQiRhCmdjc9 9KY0Ed8qODSWu0oxbKC1uKFU3yK1OCpR1XLao3K9vIAMT/07Oi9VRkPJa+sq54uFxKD13nMWmez plEx+bPXu1RYpvvHDzTJYWlr105Qq5de2ZIVfuF X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--10.409100-5.000000 X-TMASE-Version: SMEX-14.0.0.3223-9.1.2019-28928.001 X-TM-SNTS-SMTP: 38195A61FBA21453859DC240AABB3CC3127B66DE096528BB9832C3CB23CAE47A2000:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_VALIDITY_CERTIFIED_BLOCKED=0.001, RCVD_IN_VALIDITY_RPBL_BLOCKED=0.001, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/cran.scm (r-optimparallel): New variable. Change-Id: Id2615f15090036c21754b399e897086c06a38c4f --- gnu/packages/cran.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) base-commit: 7aae0e2c159b1612b405a372b18f25fbb58f9d82 diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 7489954875..410de79ecf 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -27716,6 +27716,34 @@ (define-public r-bookdown authoring books and technical documents with R Markdown.") (license license:gpl3))) +(define-public r-optimparallel + (package + (name "r-optimparallel") + (version "1.0-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "optimParallel" version)) + (sha256 + (base32 "178ayfaivkbxkghxbg97lx4gl27kxkmgaaw9y8q5206r4cncd6qg")))) + (properties `((upstream-name . "optimParallel"))) + (build-system r-build-system) + (arguments + (list + #:phases '(modify-phases %standard-phases + (add-after 'unpack 'set-HOME + (lambda _ + (setenv "HOME" "/tmp")))))) + (native-inputs (list r-numderiv r-r-rsp r-testthat)) + (home-page "https://github.com/florafauna/optimParallel-R") + (synopsis "Parallel version of the L-BFGS-B optimization method") + (description + "This toole provides a parallel version of the L-BFGS-B method of @code{optim()}. +The main function of the package is @code{optimParallel()}, which has the +same usage and output as @code{optim()}. Using @code{optimParallel()} +can significantly reduce the optimization time.") + (license license:gpl2+))) + (define-public r-options (package (name "r-options")