From patchwork Wed Apr 7 08:17:00 2021 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Roel Janssen X-Patchwork-Id: 28350 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2284227BC68; Wed, 7 Apr 2021 09:18:09 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.2 (2018-09-13) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, RCVD_IN_MSPIKE_H4,RCVD_IN_MSPIKE_WL,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.2 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 9103727BC67 for ; Wed, 7 Apr 2021 09:18:08 +0100 (BST) Received: from localhost ([::1]:42690 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1lU3O3-0001P3-Mu for patchwork@mira.cbaines.net; Wed, 07 Apr 2021 04:18:07 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:50230) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1lU3Ny-0001Ot-CW for guix-patches@gnu.org; Wed, 07 Apr 2021 04:18:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:59697) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1lU3Ny-0005fE-2k for guix-patches@gnu.org; Wed, 07 Apr 2021 04:18:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1lU3Nx-0000m3-Td for guix-patches@gnu.org; Wed, 07 Apr 2021 04:18:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#47635] [PATCH] gnu: Add r-hmm. Resent-From: Roel Janssen Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Wed, 07 Apr 2021 08:18:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 47635 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 47635@debbugs.gnu.org X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16177834332907 (code B ref -1); Wed, 07 Apr 2021 08:18:01 +0000 Received: (at submit) by debbugs.gnu.org; 7 Apr 2021 08:17:13 +0000 Received: from localhost ([127.0.0.1]:43010 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lU3N7-0000kl-87 for submit@debbugs.gnu.org; Wed, 07 Apr 2021 04:17:13 -0400 Received: from lists.gnu.org ([209.51.188.17]:44162) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1lU3N3-0000kZ-RG for submit@debbugs.gnu.org; Wed, 07 Apr 2021 04:17:07 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:50038) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1lU3N3-0001Ht-ML for guix-patches@gnu.org; Wed, 07 Apr 2021 04:17:05 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]:42273) by eggs.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1lU3N3-00058o-Er for guix-patches@gnu.org; Wed, 07 Apr 2021 04:17:05 -0400 Received: from 2001-1c02-0b2a-aa00-2eb3-e528-5257-7587.cable.dynamic.v6.ziggo.nl ([2001:1c02:b2a:aa00:2eb3:e528:5257:7587]:54130) by fencepost.gnu.org with esmtpsa (TLS1.2:RSA_AES_256_CBC_SHA1:256) (Exim 4.82) (envelope-from ) id 1lU3N1-0007AJ-9o for guix-patches@gnu.org; Wed, 07 Apr 2021 04:17:04 -0400 Message-ID: <0c15c3cc79e536933ee8c4e6513e39d2e06a10c4.camel@gnu.org> From: Roel Janssen Date: Wed, 07 Apr 2021 10:17:00 +0200 User-Agent: Evolution 3.38.4 (3.38.4-1.fc33) MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches Dear Guix, I'd like to add r-hmm. See attached patch. Kind regards, Roel Janssen From 15be497145e041f9a53250437604a94a97f12bbb Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Wed, 7 Apr 2021 10:14:35 +0200 Subject: [PATCH] gnu: Add r-hmm. * gnu/packages/cran.scm (r-hmm): New variable. --- gnu/packages/cran.scm | 21 ++++++++++++++++++++- 1 file changed, 20 insertions(+), 1 deletion(-) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 044ad8f5bb..1b244bcc9a 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2015 Andreas Enge ;;; Copyright © 2015, 2016 Pjotr Prins ;;; Copyright © 2016, 2017 Ben Woodcroft -;;; Copyright © 2016, 2017, 2018, 2020 Roel Janssen +;;; Copyright © 2016, 2017, 2018, 2020, 2021 Roel Janssen ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice ;;; Copyright © 2017 Raoul Bonnal ;;; Copyright © 2018 Vijayalakshmi Vedantham @@ -1058,6 +1058,25 @@ the embedded @code{RapidXML} C++ library.") into a pipeline of data manipulation and visualisation.") (license license:gpl3))) +(define-public r-hmm + (package + (name "r-hmm") + (version "1.0") + (source (origin + (method url-fetch) + (uri (cran-uri "HMM" version)) + (sha256 + (base32 + "0z0hcqfixx1l2a6d3lpy5hmh0n4gjgs0jnck441akpp3vh37glzw")))) + (properties `((upstream-name . "HMM"))) + (build-system r-build-system) + (home-page "http://cran.r-project.org/web/packages/HMM/") + (synopsis "Hidden Markov Models") + (description "This package provides an easy to use library to setup, apply +and make inference with discrete time and discrete space hidden markov +models.") + (license license:gpl2+))) + (define-public r-httpuv (package (name "r-httpuv") -- 2.30.2