From patchwork Fri Apr 17 22:22:54 2020 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vincent Legoll X-Patchwork-Id: 21345 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id BFA7E27BBE4; Fri, 17 Apr 2020 23:24:24 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.2 (2018-09-13) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI,T_DKIM_INVALID autolearn=unavailable autolearn_force=no version=3.4.2 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTP id 96EEC27BBE1 for ; Fri, 17 Apr 2020 23:24:24 +0100 (BST) Received: from localhost ([::1]:52642 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jPZPM-0003aV-2a for patchwork@mira.cbaines.net; Fri, 17 Apr 2020 18:24:24 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:55753) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jPZP2-0003ZH-Ua for guix-patches@gnu.org; Fri, 17 Apr 2020 18:24:06 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1jPZP0-00053O-LX for guix-patches@gnu.org; Fri, 17 Apr 2020 18:24:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:58532) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1jPZP0-00052t-Hk for guix-patches@gnu.org; Fri, 17 Apr 2020 18:24:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1jPZP0-0004Nr-Ct for guix-patches@gnu.org; Fri, 17 Apr 2020 18:24:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#40691] [PATCH 0/1] gnu: Add gromacs. Resent-From: Vincent Legoll Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Fri, 17 Apr 2020 22:24:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 40691 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 40691@debbugs.gnu.org X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.158716218316765 (code B ref -1); Fri, 17 Apr 2020 22:24:02 +0000 Received: (at submit) by debbugs.gnu.org; 17 Apr 2020 22:23:03 +0000 Received: from localhost ([127.0.0.1]:41845 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jPZO2-0004ML-Oe for submit@debbugs.gnu.org; Fri, 17 Apr 2020 18:23:02 -0400 Received: from lists.gnu.org ([209.51.188.17]:57523) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jPZO1-0004M0-PH for submit@debbugs.gnu.org; Fri, 17 Apr 2020 18:23:02 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:54612) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jPZO0-0002hX-Kb for guix-patches@gnu.org; Fri, 17 Apr 2020 18:23:01 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1jPZNz-0003Wk-KI for guix-patches@gnu.org; Fri, 17 Apr 2020 18:23:00 -0400 Received: from mail-wr1-x431.google.com ([2a00:1450:4864:20::431]:37182) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1jPZNz-0003RE-DB for guix-patches@gnu.org; Fri, 17 Apr 2020 18:22:59 -0400 Received: by mail-wr1-x431.google.com with SMTP id k1so4789522wrx.4 for ; Fri, 17 Apr 2020 15:22:59 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=to:from:subject:message-id:date:user-agent:mime-version :content-language:content-transfer-encoding; bh=Jzr0COMI1L3fXghOyBoycR0+30ffkPJPD4aN1REhr9w=; b=UbYFoVHsluSX2p8Jf7wljncs5ABmwF8mdGdR5iBth6E67wE7imMIlq9ietaNEU4zMJ 6zGW3dslRkgku3kTLHwuZ9V/bI2dplz1XFzya1S7JB8WOeNFK9G690taE8qywnf5ugRj fIN7yGvh3jJlymEuN0oivmrPA8pVPi+9Y8WAvX3ThjSkiJphtDMf/rofNQ/Qi2/1/zuP NMjojoEFnZIvr7YXSrUBQkI1AODYK9UjT56rvogwn7w++Fwha9JHhe+YyAz0sDPQ727a 1avlp0JbKF6pTe2QOoGx55xdmJch2DntWpcACa6asvCmnnC9+ELV5f6aD7vH1ztbf8LE BXvQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:to:from:subject:message-id:date:user-agent :mime-version:content-language:content-transfer-encoding; bh=Jzr0COMI1L3fXghOyBoycR0+30ffkPJPD4aN1REhr9w=; b=arfZZ7nX3ZOy49Z2L/+MkH87gZdQSX2nel6BREFNoVqbr23NJpbyAzRuRw3shutjXI wPvMcGeSRNKHgh60BjuxJXRNBtHtU00rRlQDScK4Kwa2IxT6mqR67/eSWhs3VzbUEB53 AAeOmmEMBIaJ+ZOCiTmvNKYHGi1QfeOx5zEYcMdHjhSk70WMnAvAnc0LCaKZmuFIKH0m u0RpBwILJW/WSPkFz8B0iwK3TsVr7PdlcMIbIOU/KqqMbLLJtiKKs4Vgy8EO4pdFse+Q erKYsf8uCn3VZD24IbwxvxfiE0gF3aAB0UVkbmy/I9p2fTcy1QVYFXzp35sz1J/WeOtm D3KQ== X-Gm-Message-State: AGi0PuZRS1oI8NoEzh6Nbt2f/C18UiqoXd3qowZl+v6aE0ElI0SkExkm duXewYW6N/EE4nmalXpAiPabpCHJ X-Google-Smtp-Source: APiQypIfhg5V+WpszScjVEiejF7okoaeFJTnzAUWbOZ7n8sfH30P2DsT5eEsTjw0Y0E8BBL77iFW5Q== X-Received: by 2002:a5d:5386:: with SMTP id d6mr3969470wrv.222.1587162177706; Fri, 17 Apr 2020 15:22:57 -0700 (PDT) Received: from [10.0.0.2] (se167-1-82-242-148-1.fbx.proxad.net. [82.242.148.1]) by smtp.gmail.com with ESMTPSA id r20sm8996181wmh.26.2020.04.17.15.22.56 for (version=TLS1_3 cipher=TLS_AES_128_GCM_SHA256 bits=128/128); Fri, 17 Apr 2020 15:22:56 -0700 (PDT) From: Vincent Legoll Message-ID: Date: Sat, 18 Apr 2020 00:22:54 +0200 User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:68.0) Gecko/20100101 Thunderbird/68.7.0 MIME-Version: 1.0 Content-Language: en-US X-detected-operating-system: by eggs.gnu.org: Genre and OS details not recognized. X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-Received-From: 209.51.188.43 X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches Hello, following this is a patch to add gromacs. Description & synopsis taken from nix (hello Tobias) Linted, indent-code.el passed, and built OK with 2 rounds. Not sure if we want more cmake flags. problems reported by cmake: -- Found Doxygen: /gnu/store/k6albjaxkybsgshqyw6g44f5hz75l7q6-doxygen-1.8.15/bin/doxygen (found version "1.8.15") found components: doxygen missing components: dot -- Could NOT find Sphinx: Found unsuitable version "-real 2.3.1", but required is at least "1.6.1" (found /gnu/store/anyhb84x3mvyp11sbhmdnicbsa42m3x0-python-sphinx-2.3.1/bin/sphinx-build)