From patchwork Tue Apr 26 12:44:26 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Arun Isaac X-Patchwork-Id: 739 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 12F6A27BBEA; Tue, 26 Apr 2022 13:46:28 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id DA7A027BBE9 for ; Tue, 26 Apr 2022 13:46:27 +0100 (BST) Received: from localhost ([::1]:46576 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1njKaI-0005xT-Vk for patchwork@mira.cbaines.net; Tue, 26 Apr 2022 08:46:27 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:42768) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1njKYw-0004jA-PB for guix-patches@gnu.org; Tue, 26 Apr 2022 08:45:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:43627) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1njKYw-0006Vf-Ew for guix-patches@gnu.org; Tue, 26 Apr 2022 08:45:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1njKYw-0002sH-AH for guix-patches@gnu.org; Tue, 26 Apr 2022 08:45:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55125] [PATCH 0/9] Cross-compile vcflib for RISC-V Resent-From: Arun Isaac Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 26 Apr 2022 12:45:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 55125 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55125@debbugs.gnu.org Cc: Arun Isaac X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.165097708410991 (code B ref -1); Tue, 26 Apr 2022 12:45:02 +0000 Received: (at submit) by debbugs.gnu.org; 26 Apr 2022 12:44:44 +0000 Received: from localhost ([127.0.0.1]:37521 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1njKYe-0002rD-38 for submit@debbugs.gnu.org; Tue, 26 Apr 2022 08:44:44 -0400 Received: from lists.gnu.org ([209.51.188.17]:54032) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1njKYc-0002r3-BS for submit@debbugs.gnu.org; Tue, 26 Apr 2022 08:44:42 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:42676) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1njKYb-0004XA-Lx for guix-patches@gnu.org; Tue, 26 Apr 2022 08:44:41 -0400 Received: from mugam.systemreboot.net ([139.59.75.54]:45488) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1njKYW-0006Td-2o for guix-patches@gnu.org; Tue, 26 Apr 2022 08:44:40 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=systemreboot.net; s=default; h=Content-Transfer-Encoding:MIME-Version: Message-Id:Date:Subject:Cc:To:From:Sender:Reply-To:Content-Type:Content-ID: Content-Description:Resent-Date:Resent-From:Resent-Sender:Resent-To:Resent-Cc :Resent-Message-ID:In-Reply-To:References:List-Id:List-Help:List-Unsubscribe: List-Subscribe:List-Post:List-Owner:List-Archive; bh=L9kl5d1HEe2BN47U7cRjuVybheWPTvF98VKuX8apyQ0=; b=n5Y6cGv0hSYMzN0BbU3xKcChos /oi9L7VuN0m+9zQ5rggF0FxSGNK0+c570LZSGGUVIx8/OrlcP71XP+K9cbh0hSxNfVfRSc3yQy71f ti0J9OwNGstjhmd76TXgN8QU2DP58l8UqYCtTKj/WbB3C4pA4P4WAT7C2K3mXGbGIkLNDT3OuJT4I ShxPaZJgLlHCr3Lo9LMjcDs++mFki2JKVloRRsAsD48ya1Jy18SiLT0rs8c8guBXChOqoqp8ex3I2 dMN5X6/8go9U8r5N8pOu6b8XZrn3ztGQeRD6asr/cbPlwa7lo/tHN+NkPpP/A7Ay4CXpdPB9bfri1 BgUWoF5Q==; Received: from [192.168.2.1] (port=53776 helo=localhost.localdomain) by systemreboot.net with esmtpsa (TLS1.3) tls TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384 (Exim 4.95) (envelope-from ) id 1njKYO-000HJ8-1Y; Tue, 26 Apr 2022 18:14:28 +0530 From: Arun Isaac Date: Tue, 26 Apr 2022 18:14:26 +0530 Message-Id: <20220426124426.16845-1-arunisaac@systemreboot.net> X-Mailer: git-send-email 2.35.1 MIME-Version: 1.0 Received-SPF: pass client-ip=139.59.75.54; envelope-from=arunisaac@systemreboot.net; helo=mugam.systemreboot.net X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches This patchset patches the vcflib package and dependencies so that they successfully cross-compile for the riscv64-linux-gnu target. Arun Isaac (9): gnu: tabixpp: Use G-expressions. gnu: tabixpp: Use #:make-flags. gnu: tabixpp: Use build tools specific to the target. gnu: tabixpp: Add bzip2 and xz to inputs. gnu: fastahack: Use G-expressions. gnu: fastahack: Use compiler specific to the build target. gnu: vcflib: Use G-expressions. gnu: vcflib: Find submodule sources in native-inputs during cross-compilation. gnu: vcflib: Set absolute path to pkg-config. gnu/packages/bioinformatics.scm | 257 ++++++++++++++++---------------- 1 file changed, 132 insertions(+), 125 deletions(-)